Tools on-line
Genomics and Proteomics Databases
National Center For Biotechnology Information (NCBI)
NCBI creates public databases, conducts research in computational biology, develops software tools for analyzing genome data.
The Arabidopsis Information Resource (TAIR)
TAIR provides a comprehensive resource for the scientific community working with Arabidopsis thaliana, a widely used model plant. TAIR consists of a searchable relational database, which includes many different datatypes.
ExPASy Molecular Biology Server
The ExPASy (Expert Protein Analysis System) proteomics server of the Swiss Institute of Bioinformatics (SIB) is dedicated to the analysis of protein sequences and structures as well as 2-D PAGE.

National Center for Genome Resources (NCGR)
Genome tools for plant scientists : In collaboration with users worldwide, NCGR creates biological databases and analytical tools to accelerate and enable discovery. Primary research areas include genomics, biochemical pathways and gene expression

The Protein Data Bank (PDB)
The single worldwide repository for the processing and distribution of 3-D biological macromolecular structure data
A Comparative Mapping Resource for Grains
Gramene was funded by the USDA IFAFS programme to create a curated, open-source, Web-accessible data resource for comparative genome analysis in the grasses.
Munich information center for protein sequences (mips)
The Institute for Bioinformatics (IBI) of the GSF-Forschungszentrum invites applications for several positions in genome oriented bioinformatics.
The Institute for Genomic Research (TIGR)
National Institute of Genetics (NIG)
The UK Crop Plant Bioinformatics Network
Plant and Animal Genome Analysis special initiative

OWL is a non-redundant composite of 4 publicly-available primary sources: SWISS-PROT, PIR (1-3), GenBank (translation) and NRL-3D. SWISS-PROT is the highest priority source, all others being compared against it to eliminate identical and trivially-different sequences.

The ProDom project is supported by INRA, C.N.R.S., the Toulouse Genopole, the European Commission, and the French minister of Research.
The European Bioinformatics Institute (EBI) is a non-profit academic organisation that forms part of the European Molecular Biology Laboratory (EMBL).
Human Proteome Organisation (Hupo)
Pôle Bio-Informatique Lyonnais


Biochemical pathways - Enzyme nomenclature

Metabolic pathways of biochemistry
The George Washington University - Washington, D.C

Kyoto Encyclopedia of Genes and Genomes (KEGG)
Links to Pathway and Other Databases



Proteomics sites

Analysis of Microbial Proteomes
Department of Medical Microbiology,
University of Aberdeen

Danish Centre for Human Genome Research
Human 2D Databases for proteome analysis in health and disease,
University of Aarhus


Technological network Plant Proteome

Fachgebiet Proteomik
The focus of the Proteomics Group at the Technical University of Munich
Portuguese Proteomics Network
Proteome of Xylella fastidiosa